Benoit Ballester

Postdoctoral Researcher 2008-2012

EMBL-EBI

Publications

• B Ballester, A Medina-Rivera, D Schmidt, M Gonzàlez-Porta, M Carlucci, X Chen, K Chessman, AJ Faure, AP Funnell, A Goncalves, C Kutter, M Lukk, S Menon, WM McLaren, K Stefflova, S Watt, MT Weirauch, M Crossley, JC Marioni, DT Odom, P Flicek, MD Wilson. Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways. Elife2014;3:e02626. doi:10.7554/eLife.02626
• APW Funnell, MD Wilson, B Ballester, KS Mak, J Burdach, N Magan, RCM Pearson, FP Lemaigre, KM Stowell, DT Odom, P Flicek, M Crossley. A CpG Mutational Hotspot in a ONECUT Binding Site Accounts for the Prevalent Variant of Hemophilia B Leyden. Am J Hum Genet 2013;92(3):460–467. doi:10.1016/j.ajhg.2013.02.003
• D Schmidt, PC Schwalie, MD Wilson, B Ballester, A Gonçalves, C Kutter, GD Brown, A Marshall, P Flicek, DT Odom. Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages. Cell 2012;148(1-2):335–348. doi:10.1016/j.cell.2011.11.058
• B Ballester, N Johnson, G Proctor, P Flicek. Consistent annotation of gene expression arrays. BMC Genomics 2010;11(1):294. doi:10.1186/1471-2164-11-294
• D Schmidt, MD Wilson, B Ballester, PC Schwalie, GD Brown, A Marshall, C Kutter, S Watt, CP Martinez-Jimenez, S Mackay, I Talianidis, P Flicek, DT Odom. Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding. Science 2010;328(5981):1036–1040. doi:10.1126/science.1186176
• M Carlile, D Swan, K Jackson, K Preston-Fayers, B Ballester, P Flicek, A Werner. Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues. Nucleic Acids Res 2009;37(7):2274–2282. doi:10.1093/nar/gkp088